User:Eran Hodis/P2J

The PyMOL2Jmol Translator fails to translate certain features:

Issues we are working to solve

 * 1) Zoom does not translate.
 * 2) Wireframe thickness appears too thin (0.pse, 6.pse, 11.pse)
 * 3) Only some of the wireframe appears too thin here (15.pse)
 * 4) A surface over 2 chains appears broken (2.pse)
 * 5) Fidelity of surface coloring (3.pse, 14.pse)
 * 6) Fidelity of wireframe coloring (4.pse)
 * 7) Slab & depth are not translated (6.pse)
 * 8) Waters shown as crosses are translated to spheres (6.pse) -- May be a Jmol limitation. Could make spheres smaller at least. (but they look good here 11.pse)
 * 9) Translation of translucency is sometimes too opaque (9.pse)
 * 10) But here translucent surface looks good (11.pse)

Issues we accept for the time being

 * 1) Inability to translate movies.

Issues due to Jmol
These issues are only solvable through changes to Jmol
 * 1) Dotted measurements in Jmol have a set width that can look narrow compared to measurement objects in PyMOL.

Issues due to PyMOL
These issues are only solvable through changes to PyMOL